Error: PDB with < 10 or > 600 c-alpha atoms not allowed
This Bio3D WebApp provides a rapid and rigorous tool for normal mode analysis of protein structures. Options include multiple popular elastic network models (ENMs), as well as enhanced analyses including residue fluctuations, mode visualization, dynamic cross-correlations, and overlap analysis.
Start by entering a PDB code of interest then proceed by navigating through following the NEXT buttons.
calpha: Hinsen, K. et al. (2000) Chemical Physics 261 25-37
anm: Atilgan, A.R. et al. (2001) Biophysical Journal 80 505-515.
sdenm: Dehouck Y. & Mikhailov A.S. (2013) PLoS Comput Biol 9 :e1003209.
reach: Moritsugu K. & Smith J.C. (2008) Biophysical Journal 95 1639-1648.
pfanm: Yang, L. et al. (2009) PNAS 104 .